Pizza Cupcakes

Individual deep-dish style mini pizzas baked in a muffin tin — perfect for game day, lunch boxes, and picky eaters. Quick, customizable, and delicious.

These Pizza Cupcakes are my go-to party trick for busy weekends and casual gatherings. I first discovered the idea while prepping snacks for a neighborhood movie night: I wanted the comforting flavors of a deep-dish pizza but in a handheld size that wouldn’t require plates or forks. After a couple of trials—adjusting dough thickness, fiddling with sauce quantity and pre-cooking certain toppings—I landed on this version that reliably gives a crisp-sided cup, a saucy, savory filling and a melty cheese crown. The texture is a pleasing contrast between the slightly chewy crust and the warm, bubbling center, and they travel well for picnics, school lunches or tailgate spreads.
What makes this variation special is how forgiving it is. The foundation is a quick pizza dough that presses into muffin cups to form a sturdy shell, and the filling can be tailored to whatever you have on hand. I love using a mix of mozzarella and a sharp cheese for depth, plus little bits of cooked bacon or pepperoni for a salty hit. These cupcakes have become a favorite with my kids and their friends: they disappear first at parties and are often requested for birthday snack tables. They also adapt well to dietary swaps like dairy-free cheese or turkey pepperoni, making them useful when feeding a crowd with different needs.
Why You'll Love This Recipe
- Make-ahead friendly: prepare and freeze individually for quick reheating on busy days, saving time on busy nights and last-minute guests.
- Portable and portion-controlled: perfect for lunchboxes, potlucks, and game day because each piece is a single-serving deep-dish style bite.
- Uses pantry staples: common ingredients like pizza dough, sauce, cheese and simple toppings mean you can assemble these with what you likely have on hand.
- Customizable: swap meats and vegetables easily to suit dietary preferences; use pre-cooked vegetables to avoid soggy centers.
- Quick to make: active preparation about 20 minutes and bake time around 15 minutes—ready in about 35 minutes total.
- Crowd-pleaser: familiar pizza flavors presented in a fun format that is appealing to both kids and adults.
I remember bringing a batch to a school fundraiser and watching them vanish; parents complimented how neat and convenient they were for little hands. Over time I refined the dough thickness and the amount of sauce so the bottoms stay crisp—little tweaks that make all the difference. My family always asks for extra napkins and seconds.
Ingredients
- Pizza dough: Use one batch of quick 15-minute dough or one store-bought dough ball (about 1 pound). Look for dough labeled for pizzas or artisan crusts; if buying premade, choose a dough that holds shape well when pressed into a tin.
- Pizza sauce: 3/4 cup of your favorite jarred or homemade sauce. I often use Primo Traditional or a simple tomato-herb sauce; avoid overly watery sauces to keep the bottoms crisp.
- Bacon or meat: 3/4 cup chopped cooked bacon (about 6 slices) or an equivalent of diced ham or pepperoni. Precook and drain any fatty meats to reduce grease in the cups.
- Mozzarella cheese: 1 cup shredded low-moisture mozzarella, divided. Use a block you shred yourself for the best melt and lower moisture content.
- Red onion: 1/3 cup finely chopped for a bright, savory bite; sauté first if you prefer a milder, sweeter flavor.
- Sliced black olives: About 3/4 cup drained (one small 7-ounce can or roughly 200 ml). Rinse to remove packing brine if desired.
Instructions
Preheat and prepare: Preheat the oven to 375 degrees F. Spray a 12-cup muffin tin with nonstick spray or lightly oil each cup. This temperature crisps the edges without over-browning the cheese. Have your dough and fillings staged so assembly is quick. Roll and cut the dough: Turn the dough out onto a lightly floured surface and roll to about 1/8 inch thickness. Use a round cutter or a mug roughly 4 inches in diameter to cut 12 circles. Cutting rounds slightly larger than the muffin opening ensures the sides are fully covered and will form a cup when pressed in. Line the cups: Press each dough circle gently into the muffin tin, pushing up the sides so each cup has a defined wall. If the dough springs back, chill the tray for 5 minutes to relax the gluten, then press again. Lightly prick the bottom once with a fork to allow steam to escape if you prefer a crisper base. Assemble the filling: In a small bowl, combine 3/4 cup pizza sauce, the cooked chopped bacon or chosen meat, 1/3 cup chopped red onion, drained sliced black olives and 1/2 cup of the shredded mozzarella. Mix so the sauce coats the toppings, but avoid making the mixture soupy. Fill and top: Spoon about 2 tablespoons of the topping mixture into each dough-lined cup, distributing evenly. Sprinkle the remaining 1/2 cup shredded mozzarella across the tops so each cupcake gets a cheesy finish. Bake and finish: Bake 14 to 16 minutes until the edges are lightly browned and the cheese is bubbly. Watch closely near the end—oven temperatures vary. Remove immediately from the tin and transfer to a wire rack to cool slightly before serving.
You Must Know
- Moisture management is key: use low-moisture mozzarella and avoid overly wet toppings to keep the crust crisp and prevent soggy bottoms.
- Pre-cook watery vegetables such as mushrooms, bell peppers or spinach to drive off excess water before assembly.
- These freeze well: flash freeze on a tray before bagging to keep individual pieces from sticking together; reheat in the oven for best texture.
- Let them rest for 2 to 3 minutes after baking before removing from the tin so the cups firm up and lift out neatly.
What I love most about these is how forgiving they are: small changes in toppings or cheese blends still produce a satisfying result. At a recent family soccer watch party I made three varieties—classic bacon, pepperoni & basil, and a vegetarian mushroom version—and each disappeared faster than I could slice more dough. The ability to customize individual cups meant everyone could sample different flavors without arguments over slices.
Storage Tips
Store cooled cupcakes in an airtight container in the refrigerator for up to 3 days. To freeze, arrange on a baking sheet lined with parchment and freeze until solid, then transfer to a freezer-safe bag for up to 3 months. To reheat from frozen, bake on a sheet at 350 degrees F for 12 to 15 minutes or until heated through and the crust is crisp. For best texture, avoid microwaving straight from frozen; if you must, microwave briefly then finish in a hot oven or toaster oven to restore crispness.
Ingredient Substitutions
Make them dairy-free by using a plant-based shredded cheese and a dairy-free dough. For a gluten-free option, choose a certified gluten-free pizza dough or par-bake gluten-free pita rounds pressed into the tin. Swap bacon for turkey bacon or cooked sausage to reduce fat, or use diced, pre-cooked chicken for a milder profile. If olives are not your thing, substitute roasted red peppers or sliced cherry tomatoes after removing excess juices.
Serving Suggestions
Serve warm with a small side of extra pizza sauce for dipping and a fresh green salad to balance the richness. For kid-friendly parties, arrange with a variety of dipping sauces—garlic butter, ranch, and marinara. Garnish with chopped fresh basil or a sprinkle of chili flakes for adults. These are also great on a buffet table alongside sliders and veggie platters.
Cultural Background
This handheld interpretation draws inspiration from American deep-dish and pan pizza traditions, where high-sided crusts hold generous amounts of sauce and toppings. The idea of baking pizza in muffin tins borrows from small-batch savory tarts and American party food innovation—transforming familiar flavors into convenient, shareable portions. It’s a playful modern twist on classic comfort-food elements.
Seasonal Adaptations
In summer, use fresh cherry tomatoes, basil and diced grilled zucchini for a lighter version; in autumn, swap in roasted butternut squash, sage and a little gorgonzola for a savory seasonal twist. For holiday gatherings, use cranberry-balsamic glazed onions and roasted turkey with a touch of sharp cheddar to echo festive flavors.
Meal Prep Tips
Assemble the dough cups and store them lined in the tin covered with plastic wrap for up to 24 hours, then fill and bake when ready. Alternatively, fully bake a double batch, cool, and freeze individually to reheat for quick lunches—pair with a crisp salad for a balanced meal. Label freezer bags with the date and reheat instructions so guests or family members can do it themselves.
These little pizza cups are a small joy—easy to customize, simple to make ahead, and always a crowd favorite. Give them a try the next time you need an easy, portable snack that tastes like celebration in miniature.
Pro Tips
Do not overfill with sauce; use just enough to coat the filling to avoid soggy bottoms.
Pre-cook watery vegetables to remove excess moisture before adding to the filling.
Cut dough rounds slightly larger than the muffin opening so they press up the sides to form a full cup.
Add a small spoonful of shredded cheese to the bottom of each cup as a moisture barrier before adding the filling.
Allow cupcakes to rest 2–3 minutes before removing so they firm up and lift easily from the tin.
This nourishing pizza cupcakes recipe is sure to be a staple in your kitchen. Enjoy every moist, high protein slice — it is perfect for breakfast or as a wholesome snack any time.
FAQs about Recipes
Can I freeze these?
Yes. Cool completely, freeze on a tray until solid, then transfer to a freezer bag for up to 3 months. Reheat in the oven at 350°F for 12–15 minutes.
What temperature and time should I bake them?
Use 375°F and bake until the crust is lightly browned and cheese is bubbly, about 14–16 minutes depending on your oven.
Tags
Pizza Cupcakes
This Pizza Cupcakes recipe makes perfectly juicy, tender, and flavorful steak every time! Serve with potatoes and a side salad for an unforgettable dinner in under 30 minutes.

Ingredients
Pizza dough
Filling
Instructions
Preheat and prepare pan
Preheat oven to 375°F. Lightly spray a 12-cup muffin tin with nonstick spray or brush with oil so the dough cups release easily after baking.
Roll and cut dough
Roll dough on a lightly floured surface to 1/8 inch thickness. Cut 12 rounds with a 4-inch cutter or mug; rounds slightly larger than the tin opening work best.
Line the muffin cups
Press each dough round into the muffin cups, pushing up the sides to form a cup. Chill briefly if the dough springs back, then press again for even walls.
Mix filling
Combine pizza sauce, cooked meat, chopped onion, drained olives and 1/2 cup shredded mozzarella in a bowl. Stir so sauce coats the toppings but isn’t watery.
Fill and top
Spoon about 2 tablespoons of the filling into each dough-lined cup. Sprinkle the remaining 1/2 cup mozzarella evenly on top of all 12 cups.
Bake and cool
Bake 14 to 16 minutes until edges are lightly browned and cheese is bubbly. Remove from oven, let rest 2–3 minutes, then transfer to a wire rack to cool slightly before serving.
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Comments (1)
This recipe looks amazing! Can't wait to try it.
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